Tutorial Hub

Bioinformatics Tutorials

This section brings together practical bioinformatics tutorials from Bioinformatics with BB. Each tutorial includes step-by-step notes, commands, workflow guidance, and a clear roadmap for what comes next.

RNA-seq Available More Tutorials Coming Soon

Tutorial Library

Start with the active RNA-seq series, then use the roadmap cards below to see what will be added next.

RNA-seq Analysis

From introduction to hands-on workflow.

Available

The first complete tutorial in the section. Covers the overview, video-linked parts, practical commands, workflow notes, and troubleshooting.

Whole Exome Sequencing

Targeted analysis workflow and interpretation.

Coming Soon

End-to-end guide covering data preparation, variant discovery, filtering, and reporting.

Variant Calling Pipeline

Short variant detection with practical notes.

Coming Soon

Pipeline structure, common QC checkpoints, and interpretation principles for variant calling workflows.

RNA-seq Differential Expression

Normalization, DESeq2, and results interpretation.

Coming Soon

This will extend the active RNA-seq tutorial into downstream statistical analysis and biological interpretation.

Microbiome Analysis

Community profiling and interpretation basics.

Coming Soon

Planned coverage includes preprocessing, taxonomy workflows, diversity analysis, and visualization.

GWAS Basics

Association testing concepts and workflow.

Coming Soon

A practical introduction to GWAS setup, quality control, association testing, and interpretation.

Protein-Protein Interaction Analysis

Network-level exploration for functional insight.

Coming Soon

Planned tutorial for building, visualizing, and interpreting interaction networks in biological context.

Neoantigen Analysis

Workflow notes for translational immunogenomics.

Coming Soon

Future guide for candidate neoantigen prioritization, filtering logic, and presentation of results.

Clinical Variant Interpretation

Evidence-based review of sequence variants.

Coming Soon

This tutorial will focus on annotation, evidence review, frequency context, and clinical reporting logic.

Current structure

  • Overview page for context and workflow summary
  • Part 1 conceptual page linked to video
  • Part 2 practical page with workflow notes
  • Commands page with copyable blocks
  • Troubleshooting page with short issue-fix notes

Next RNA-seq release

  • Normalization and expression matrix handling
  • DESeq2 differential expression workflow
  • Visualizations and interpretation notes
  • Part 3 video-linked page

Future categories

  • Transcriptomics
  • Genomics
  • Clinical Bioinformatics
  • Microbiome
  • AI for Bioinformatics
  • Programming for Biologists